Climate change related warming is a serious environmental problem attributed to anthropogenic activities, causing ocean water temperatures to rise in the coastal marine ecosystem since the last century. This particularly affects benthic microbial communities, which are crucial for biogeochemical cycles. While bacterial communities have received considerable scientific attention, the benthic eukaryotic community response to climate change remains relatively overlooked. In this study, sediments were sampled from a heated (average 5°C increase over the whole year for over 50 years) and a control (contemporary conditions) Baltic Sea bay during four different seasons across a year. RNA transcript counts were then used to investigate eukaryotic community changes under long-term warming. The composition of active species in the heated and control bay sediment eukaryotic communities differed, which was mainly attributed to salinity and temperature. The family level RNA transcript alpha diversity in the heated bay was higher during May but lower in November, compared with the control bay, suggesting altered seasonal activity patterns and dynamics. In addition, structures of the active eukaryotic communities varied between the two bays during the same season. Hence, this study revealed that long-term warming can change seasonality in eukaryotic diversity patterns. Relative abundances and transcript expression comparisons between bays suggested that some taxa that now have lower mRNA transcripts numbers could be favored by future warming. Furthermore, long-term warming can lead to a more active metabolism in these communities throughout the year, such as higher transcript numbers associated with diatom energy production and protein synthesis in the heated bay during winter. In all, these data can help predict how future global warming will affect the ecology and metabolism of eukaryotic community in coastal sediments.

The world's oceans are challenged by climate change linked warming with typically highly populated coastal areas being particularly susceptible to these effects. Many studies of climate change on the marine environment use large, short-term temperature manipulations that neglect factors such as long-term adaptation and seasonal cycles. In this study, a Baltic Sea 'heated' bay influenced by thermal discharge since the 1970s from a nuclear reactor (in relation to an unaffected nearby 'control' bay) was used to investigate how elevated temperature impacts surface water microbial communities and activities. 16S rRNA gene amplicon based microbial diversity and population structure showed no difference in alpha diversity in surface water microbial communities, while the beta diversity showed a dissimilarity between the bays. Amplicon sequencing variant relative abundances between the bays showed statistically higher values for, e.g., Ilumatobacteraceae and Burkholderiaceae in the heated and control bays, respectively. RNA transcript-derived activities followed a similar pattern in alpha and beta diversity with no effect on Shannon's H diversity but a significant difference in the beta diversity between the bays. The RNA data further showed more elevated transcript counts assigned to stress related genes in the heated bay that included heat shock protein genes dnaKJ, the co-chaperonin groS, and the nucleotide exchange factor heat shock protein grpE. The RNA data also showed elevated oxidative phosphorylation transcripts in the heated (e.g., atpHG) compared to control (e.g., atpAEFB) bay. Furthermore, genes related to photosynthesis had generally higher transcript numbers in the control bay, such as photosystem I (psaAC) and II genes (psbABCEH). These increased stress gene responses in the heated bay will likely have additional cascading effects on marine carbon cycling and ecosystem services.

Skin microbiomes provide vital functions, yet knowledge about the drivers and processes structuring their species assemblages is limited-especially for non-model organisms. In this study, fish skin microbiome was assessed by high throughput sequencing of amplicon sequence variants from metabarcoding of V3-V4 regions in the 16S rRNA gene on fish hosts subjected to the following experimental manipulations: (i) translocation between fresh and brackish water habitats to investigate the role of environment; (ii) treatment with an antibacterial disinfectant to reboot the microbiome and investigate community assembly and priority effects; and (iii) maintained alone or in pairs to study the role of social environment and inter-host dispersal of microbes. The results revealed that fish skin microbiomes harbour a highly dynamic microbial composition that was distinct from bacterioplankton communities in the ambient water. Microbiome composition first diverged as an effect of translocation to either the brackish or freshwater habitat. When the freshwater individuals were translocated back to brackish water, their microbiome composition converged towards the fish microbiomes in the brackish habitat. In summary, external environmental conditions and individual-specific factors jointly determined the community composition dynamics, whereas inter-host dispersal had negligible effects. The dynamics of the microbiome composition was seemingly non-affected by reboot treatment, pointing towards high resilience to disturbance. The results emphasised the role of inter-individual variability for the unexplained variation found in many host-microbiome systems, although the mechanistic underpinnings remain to be identified.

This study investigates the praxis of university boards by analysing minutes from Swedish universities before and after an autonomy reform that, among other things, changed the board compositions in favour of external members. To ultimately improve higher education policy and paint a more complete picture of the operational side of governance arrangements at Swedish universities, we analyse how institutional management has changed over time. The study identifies orientations and allocations enacted in university board work and communicated in minutes from 2008 and 2018, separated by the autonomy reform of 2011. Results show a shift over time from taking decisions to receiving information, accompanied by a shift in the orientation of decisions regarding education and research to decisions on operation and interaction with society. During this period, external board members became increasingly dominant. Comparing board meeting attendance showed that external members were absent from more meetings than members that represented academic staff and students. The changing function and composition of university boards, combined with strong line management and decollegialisation, raises questions of whether and how the experience of academic core activities, peer quality management, and critical thinking contribute to shaping the policy, praxis, and institutional management of higher education.

Colour polymorphisms have long served as model systems in evolutionary studies and continue to inform about processes involved in the origin and dynamics of biodiversity. Modern sequencing tools allow for evaluating whether phenotypic differences between morphs reflect genetic differentiation rather than developmental plasticity, and for investigating whether polymorphisms represent intermediate stages of diversification towards speciation. We investigated phenotypic and genetic differentiation between two colour morphs of the butterfly Fabriciana adippe using a combination of ddRAD-sequencing and comparisons of body size, colour patterns and optical properties of bright wing spots. The silvery-spotted adippe form had larger and darker wings and reflected UV light, while the yellow cleodoxa form displayed more green scales and reflected very little UV, showcasing that they constitute distinct and alternative integrated phenotypes. Genomic analyses revealed genetic structuring according to source population, and to colour morph, suggesting that the phenotypic differentiation reflects evolutionary modifications. We report 17 outlier loci associated with colour morph, including ultraviolet-sensitive visual pigment (UVRh1), which is associated with intraspecific communication and mate choice in butterflies. Together with the demonstration that the wings of the adippe (but essentially not the cleodoxa) morph reflect UV light, that UV reflectance is higher in females than males and that morphs differ in wing size, this suggests that these colour morphs might represent genetically integrated phenotypes, possibly adapted to different microhabitats. We propose that non-random mating might contribute to the differentiation and maintenance of the polymorphism.

Context Conservation of endangered species necessitates an in-depth understanding of their ecological requirements. Particularly in landscape ecology, the behavioural tendencies of threatened butterfly species in Gotland, a biodiversity-rich island in the Baltic Sea, become crucial.

Objectives The primary aim of this study was to elucidate the movement patterns of three threatened butterfly species-Euphydryas aurinia, Parnassius apollo, and Phengaris arion-in Gotland and to identify the influence of specific land characteristics on these patterns.

Methods Our study, conducted from 2017 to 2020 across 60 km2 in Gotland, involved detailed capture-mark-recapture (CMR) efforts of 29,584 captures including 16,223 unique butterflies. We investigate the departure and arrival events of butterflies, specifically focusing on the associations between movements when individuals leave or enter a hectare grid different from their previously recorded location and key landscape features: open vegetated land, ground moisture, and forest cover. We model landscape features to examine the interplay between these and butterfly movement patterns, providing insights into preferred landscape features and conservation strategies.

Results Among the 4821 arrivals and 5083 departures documented, the species exhibited differential responses to the evaluated habitat features. Both E. aurinia and P. apollo displayed a positive density-dependent dispersal, while P. arion's movements were not significantly associated with any of the examined habitat features. Landscape properties like open vegetated land and ground moisture index statistically influenced the likelihood of arrival and departure.

Conclusions The study accentuates the relationship between land cover and the behavioural tendencies of the subject butterfly species. It has broader implications for the targeted habitat management strategies that would benefit threatened butterfly populations in Gotland.

Adaptive governance of areas set aside for future protection of biodiversity, sustainable production, and recreation requires knowledge about whether and how effects of area protection are modulated by climate change and redistribution of species. To investigate this, we compare biodiversity of plants (assessed using vegetation plots) and arthropods (collected with Malaise traps, analyzed using metabarcoding) and productivity (tree growth, determined using dendrochronology) in protected and non-protected oak ( Quercus spp.) forests along a latitudinal gradient (55.6 degrees N- 60.8 degrees N) in Sweden. We also compare historical, recent and projected future climate in the region. In contrast to established global latitudinal diversity gradients, species richness of plants and arthropods increased northwards, possibly reflecting recent climate-induced community redistributions, but neither was higher in protected than in non-protected areas, nor associated with contemporary ground temperature. Species composition of arthropods also did not differ between protected and non-protected areas. Arthropod biomass increased with latitude, suggesting that the magnitude of cascading effects mediated via their roles as pollinators, herbivores, and prey for other trophic levels, varies geographically and will change with a moving climate. Annual growth rate of oaks (an ecosystem service in the form of biomass increase and carbon sequestration) was independent of latitude and did not differ between protected and non-protected areas. Our findings question the efficacy of contemporary designation and management of protected oak forests, and emphasize that development and implementation of modified climate smart conservation strategies is needed to safeguard ecosystem functioning, biodiversity, and recreational values of protected forest areas against future challenges.

For two decades, DNA barcoding and, more recently, DNA metabarcoding have been used for molecular species identification and estimating biodiversity. Despite their growing use, few studies have systematically evaluated these methods. This study aims to evaluate the efficacy of barcoding methods in identifying species and estimating biodiversity, by assessing their consistency with traditional morphological identification and evaluating how assignment consistency is influenced by taxonomic group, sequence similarity thresholds and geographic distance. We first analysed 951 insect specimens across three taxonomic groups: butterflies, bumblebees and parasitic wasps, using both morphological taxonomy and single-specimen COI DNA barcoding. An additional 25,047 butterfly specimens were identified by COI DNA metabarcoding. Finally, we performed a systematic review of 99 studies to assess average consistency between insect species identity assigned via morphology and COI barcoding and to examine the distribution of research effort. Species assignment consistency was influenced by taxonomic group, sequence similarity thresholds and geographic distance. An average assignment consistency of 49% was found across taxonomic groups, with parasitic wasps displaying lower consistency due to taxonomic impediment. The number of missing matches doubled with a 100% sequence similarity threshold and COI intraspecific variation increased with geographic distance. Metabarcoding results aligned well with morphological biodiversity estimates and a strong positive correlation between sequence reads and species abundance was found. The systematic review revealed an 89% average consistency and also indicated taxonomic and geographic biases in research effort. Together, our findings demonstrate that while problems persist, barcoding approaches offer robust alternatives to traditional taxonomy for biodiversity assessment.

Oak species worldwide face substantial challenges in natural recruitment, significantly affecting biodiversity and ecosystem services. Oaks are a keystone species in northern temperate zones, influencing ecosystem dynamics. This study analysed oak regeneration patterns from 29 oak stands ( Quercus spp.) across southern Sweden up to the species ' northern range limit. The study focused on two native species, Q. robur and Q. petraea , and one introduced species, Q. rubra , used in Swedish forestry. We aimed to evaluate whether and how oak regeneration was i) associated with latitude, ii) influenced by ground moisture and nitrogen levels, and iii) correlated with stand age, as well as to iv) compare regeneration rates among the species. Contrary to the hypothesis that oak regeneration should decline towards the range margin, our results did not indicate any latitudinal association. This finding raises the possibility of a future northward range expansion for oaks. We also observed that oak regeneration was positively correlated with stand age, while increasing nitrogen and ground moisture levels were inversely related to regeneration. The positive age-dependent effect on recruitment also indicates that species recruitment dynamics within forests may be modified via age-dependent effects within the tree community, with implications for forestry and conservation management. Notably, the natural regeneration of the introduced Q. rubra indicates its successful adaptation to Swedish climate and forests. This study represents Sweden 's first large-scale analysis of oak regeneration across multiple oak species. Future research should prioritise longitudinal monitoring, particularly at the northern range limits, and further investigate the expansion of the potentially invasive Q. rubra .

Doctoral education is more important than ever, and PhD-student enrolment numbers are continually climbing, as is the demand for more graduates with high-level research skills. 

This mobilization can only be realized if there are sufficient well-trained researchers able to take on the challenge of supervision in a world where science is both more important than ever but also debated and mistrusted. But how do you train for supervising an individual, unique project preparing the student for an independent research career? 

At Linnaeus university with roughly 30 different PhD-programs, we have for six years now practiced and developed a 9-month special university-wide course for doctoral supervisors. The program balances between training for an individual unique project but preparing for a broader research career within what is in comparison a highly regulated education. In Sweden there is a requirement of a full four-years institutional financing before admittance, there are exam objectives, and all programs have course parts (including mandatory courses) in the span of 15-120 ECTS. There is also a national requirement for supervisors training for being a main supervisor, all this together constitute the framing of doctorates. 

The program aims to promote border-crossing exchanges of experiences between doctoral supervisors from different disciplines and collaborative learning where doctoral supervisors create a reflective community of practice together with seniors. Applicants for the supervision program are expected to have started an independent research career after their own Viva, published nationally and internationally, to have the necessary required higher education pedagogical training, and have supervision experience at advanced level.