lnu.sePublications
Change search
CiteExportLink to record
Permanent link

Direct link
Cite
Citation style
  • apa
  • ieee
  • modern-language-association-8th-edition
  • vancouver
  • Other style
More styles
Language
  • de-DE
  • en-GB
  • en-US
  • fi-FI
  • nn-NO
  • nn-NB
  • sv-SE
  • Other locale
More languages
Output format
  • html
  • text
  • asciidoc
  • rtf
Diagnostic challenges for the detection of emerging pathogens: A case study involving the incursion of Pseudomonas syringae pv. actinidiae in New Zealand
Ministry for Primary Industries, New Zealand.
Linnaeus University, Faculty of Health and Life Sciences, Department of Biology and Environmental Science. Ministry for Primary Industries, New Zealand.ORCID iD: 0000-0003-2849-1094
Ministry for Primary Industries, New Zealand;USDA-APHIS, USA.
Landcare Research, New Zealand.
Show others and affiliations
2014 (English)In: Detection and Diagnostics of Plant Pathogens: (Contributions to the 9th International Congress) / [ed] Gullino M., Bonants P., Springer, 2014, p. 71-86Chapter in book (Other academic)
Abstract [en]

In November 2010, Pseudomonas syringae pv. actinidiae (Psa) was detected for the first time in New Zealand. This finding triggered one of the largest surveillance and diagnostic programmes seen in New Zealand’s horticultural industry. During this response, over 912 kiwifruit orchards and 14,500 samples were screened and tested for the presence of Psa. The initial objectives of the response were to confirm the causal agent, determine disease prevalence and identify possible mechanisms of spread with the aim of identifying management options to contain the outbreak. Molecular diagnoses and characterisation of the Psa strains isolated during the response was conducted using a range of techniques that included qPCR, rep-PCR fingerprinting, multilocus sequence analysis, and next generation sequencing. The usefulness and challenges of using the molecular techniques available at the time for Psa detection and characterisation during the response are discussed. © Springer Science+Business Media Dordrecht 2014.

Place, publisher, year, edition, pages
Springer, 2014. p. 71-86
Series
Plant Pathology in the 21st Century ; 5
Keywords [en]
Bacteria; Molecular biology; Plasma diagnostics; Polymerase chain reaction; Space surveillance, Actinidia spp; Horticultural industry; Molecular techniques; Multilocus sequence analysis; New zealand; Next-generation sequencing; Pseudomonas syringae; Response, Diagnosis
National Category
Microbiology
Research subject
Ecology, Microbiology
Identifiers
URN: urn:nbn:se:lnu:diva-101370DOI: 10.1007/978-94-017-9020-8_5Scopus ID: 2-s2.0-84974836976ISBN: 9789401790208 (print)ISBN: 9789401790192 (print)OAI: oai:DiVA.org:lnu-101370DiVA, id: diva2:1531344
Available from: 2021-02-25 Created: 2021-02-25 Last updated: 2021-02-25Bibliographically approved

Open Access in DiVA

No full text in DiVA

Other links

Publisher's full textScopus

Authority records

Chapman, Joanne R.

Search in DiVA

By author/editor
Chapman, Joanne R.
By organisation
Department of Biology and Environmental Science
Microbiology

Search outside of DiVA

GoogleGoogle Scholar

doi
isbn
urn-nbn

Altmetric score

doi
isbn
urn-nbn
Total: 20 hits
CiteExportLink to record
Permanent link

Direct link
Cite
Citation style
  • apa
  • ieee
  • modern-language-association-8th-edition
  • vancouver
  • Other style
More styles
Language
  • de-DE
  • en-GB
  • en-US
  • fi-FI
  • nn-NO
  • nn-NB
  • sv-SE
  • Other locale
More languages
Output format
  • html
  • text
  • asciidoc
  • rtf