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Cooperativity in muscle proteins: a study of actin filaments and myosin II
Linnaeus University, Faculty of Health and Life Sciences, Department of Chemistry and Biomedical Sciences.
2014 (English)Doctoral thesis, comprehensive summary (Other academic)
Place, publisher, year, edition, pages
Linnaeus University Press, 2014. , p. 68
Series
Linnaeus University Dissertations ; 163
National Category
Biochemistry and Molecular Biology
Research subject
Natural Science, Cell and Organism Biology
Identifiers
URN: urn:nbn:se:lnu:diva-110490Libris ID: 16260357ISBN: 9789187427770 (print)OAI: oai:DiVA.org:lnu-110490DiVA, id: diva2:1638777
Public defence
2014-02-11, N2007, Västergård, Kalmar, 09:00 (English)
Opponent
Supervisors
Available from: 2022-02-17 Created: 2022-02-17 Last updated: 2024-02-06Bibliographically approved
List of papers
1. Analysis of Flexural Rigidity of Actin Filaments Propelled by Surface Adsorbed Myosin Motors
Open this publication in new window or tab >>Analysis of Flexural Rigidity of Actin Filaments Propelled by Surface Adsorbed Myosin Motors
2013 (English)In: Cytoskeleton, ISSN 1949-3584, Vol. 70, no 11, p. 718-728Article in journal (Refereed) Published
Abstract [en]

Actin filaments are central components of the cytoskeleton and the contractile machinery of muscle. The filaments are known to exist in a range of conformational states presumably with different flexural rigidity and thereby different persistence lengths. Our results analyze the approaches proposed previously to measure the persistence length from the statistics of the winding paths of actin filaments that are propelled by surface-adsorbed myosin motor fragments in the in vitro motility assay. Our results suggest that the persistence length of heavy meromyosin propelled actin filaments can be estimated with high accuracy and reproducibility using this approach provided that: (1) the in vitro motility assay experiments are designed to prevent bias in filament sliding directions, (2) at least 200 independent filament paths are studied, (3) the ratio between the sliding distance between measurements and the camera pixel-size is between 4 and 12, (4) the sliding distances between measurements is less than 50% of the expected persistence length, and (5) an appropriate cut-off value is chosen to exclude abrupt large angular changes in sliding direction that are complications, e.g., due to the presence of rigor heads. If the above precautions are taken the described method should be a useful routine part of in vitro motility assays thus expanding the amount of information to be gained from these. (c) 2013 Wiley Periodicals, Inc.

Keywords
actin, cytoskeletal filament, Monte-Carlo simulations, molecular motor
National Category
Biochemistry and Molecular Biology
Research subject
Natural Science, Biomedical Sciences
Identifiers
urn:nbn:se:lnu:diva-31271 (URN)10.1002/cm.21138 (DOI)000327310200004 ()2-s2.0-84888199072 (Scopus ID)
Available from: 2013-12-16 Created: 2013-12-16 Last updated: 2022-02-17Bibliographically approved
2. Persistence length of fascin-cross-linked actin filament bundles in solution and the in vitro motility assay
Open this publication in new window or tab >>Persistence length of fascin-cross-linked actin filament bundles in solution and the in vitro motility assay
2014 (English)In: Biochimica et Biophysica Acta - General Subjects, ISSN 0304-4165, E-ISSN 1872-8006, Vol. 1840, no 6, p. 1933-1942Article in journal (Refereed) Published
Abstract [en]

Background: Bundles of unipolar actin filaments (F-actin), cross-linked via the actin-binding protein fascin, are important in filopodia of motile cells and stereocilia of inner ear sensory cells. However, such bundles are also useful as shuttles in myosin-driven nanotechnological applications. Therefore, and for elucidating aspects of biological function, we investigate if the bundle tendency to follow straight paths (quantified by path persistence length) when propelled by myosin motors is directly determined by material properties quantified by persistence length of thermally fluctuating bundles. Methods: Fluorescent bundles, labeled with rhodamine-phalloidin, were studied at fascin:actin molar ratios: 0:1 (F-actin), 1:7, 1:4 and 1:2. Persistence lengths (Lp) were obtained by fitting the cosine correlation function (CCF) to a single exponential function: <cos(theta(0) theta(s)) > = exp(-s / (2Lp)) where theta(s) is tangent angle; s: path or contour lengths. < > denotes averaging over filaments. Results: Bundle-Lp (bundles < 15 mu m long) increased from similar to 10 to 150 mu m with increased fascin:actin ratio. The increase was similar for path-Lp (path < 15 mu m), with highly linear correlation. For longer bundle paths, the CCF-decay deviated from a single exponential, consistent with superimposition of the random path with a circular path as suggested by theoretical analysis. Conclusions: Fascin-actin bundles have similar path-Lp and bundle-Lp, both increasing with fascin:actin ratio. Path-Lp is determined by the flexural rigidity of the bundle. General significance: The findings give general insight into mechanics of cytoskeletal polymers that interact with molecular motors, aid rational development of nanotechnological applications and have implications for structure and in vivo functions of fascin-actin bundles. (C) 2014 The Authors. Published by Elsevier B.V.

Keywords
Persistence length, Fascin, Actin, Myosin, Motility assay, Monte-Carlo simulation
National Category
Biochemistry and Molecular Biology
Research subject
Natural Science, Biomedical Sciences
Identifiers
urn:nbn:se:lnu:diva-36153 (URN)10.1016/j.bbagen.2014.01.012 (DOI)000336012700034 ()2-s2.0-84897059544 (Scopus ID)
Available from: 2014-07-17 Created: 2014-07-17 Last updated: 2024-07-02Bibliographically approved
3. Nonlinear Cross-Bridge Elasticity and Post-Power-Stroke Events in Fast Skeletal Muscle Actomyosin
Open this publication in new window or tab >>Nonlinear Cross-Bridge Elasticity and Post-Power-Stroke Events in Fast Skeletal Muscle Actomyosin
2013 (English)In: Biophysical Journal, ISSN 0006-3495, E-ISSN 1542-0086, Vol. 105, no 8, p. 1871-1881Article in journal (Refereed) Published
Abstract [en]

Generation-of force and movement by actomyosin cross-bridges is the molecular basis of muscle contraction, but generally accepted ideas about cross-bridge properties have recently been questioned. Of the utmost significance, evidence for nonlinear cross-bridge elasticity has been presented. We here investigate how this and other newly discovered or postulated phenomena would modify cross-bridge operation, with focus on post-power-stroke events. First, as an experimental basis, we present evidence for a hyperbolic [MgATP]-velocity relationship of heavy-meromyosin-propelled actin filaments in the in vitro motility assay using fast rabbit skeletal muscle myosin (28-29 degrees C). As the hyperbolic [MgATP]-velocity relationship was not consistent with interhead cooperativity, we developed a cross-bridge model with independent myosin heads and strain-dependent interstate transition rates. The model, implemented with inclusion of MgATP-independent detachment from the rigor state, as suggested by previous single-molecule mechanics experiments, accounts well for the [MgATP]-velocity relationship if nonlinear cross-bridge elasticity is assumed, but not if linear cross-bridge elasticity is assumed. In addition, a better fit is obtained with load-independent than with load-dependent MgATP-induced detachment rate. We discuss our results in relation to previous data showing a nonhyperbolic [MgATP1-velocity relationship when actin filaments are propelled by myosin subfragment 1 or full-length myosin. We also consider the implications of our results for characterization of the cross-bridge elasticity in the filament lattice of muscle.

National Category
Biophysics
Research subject
Natural Science, Biomedical Sciences
Identifiers
urn:nbn:se:lnu:diva-30999 (URN)10.1016/j.bpj.2013.08.044 (DOI)000325838500017 ()2-s2.0-84886005960 (Scopus ID)
Available from: 2013-12-06 Created: 2013-12-06 Last updated: 2022-02-17Bibliographically approved

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