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Gut microbiome similarity in wild mole-rats: The effects of shared common descent
Linnaeus University, Faculty of Health and Life Sciences, Department of Biology and Environmental Science. Kalahari Research Centre, South Africa.ORCID iD: 0000-0002-8449-9843
Linnaeus University, Faculty of Health and Life Sciences, Department of Biology and Environmental Science.
Linnaeus University, Faculty of Health and Life Sciences, Department of Biology and Environmental Science.ORCID iD: 0000-0002-1152-4235
Linnaeus University, Faculty of Health and Life Sciences, Department of Biology and Environmental Science.ORCID iD: 0000-0002-8779-6464
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(English)Manuscript (preprint) (Other academic)
Abstract [en]

Group members often show high similarity in their gut microbiomes. This is typically attributed to increased social transmission of microbes within social groups and the shared environment. However, despite extensive research on within-group variation in gut microbiomes of wild hosts, between-group variation has remained less explored. Here, we use faecal samples collected from a long-term study population of wild Damaraland mole-rats (Fukomys damarensis) to study within- and between group variation in gut microbiome similarity. We show that overall, group members have more similar gut microbiomes than those of individuals from separate groups. For individuals who had dispersed to become breeders in separate groups, dispersal from the same birth group predicted more similar microbiomes. The birth group affiliation therefore has long lasting effects on the microbiome, which individuals bring with them as they disperse to establish their own groups. Our results also suggest that when these individuals start to breed, their gut microbiome is transferred to their offspring, who show higher microbiome similarity if their parents shared birth groups. Together, we show that the gut microbiome can be transferred over generations and variation between groups can be predicted by the dispersal histories of individuals. Although we also identify some environmental effects on the gut microbiome within the population, our study shows that the gut microbiome can be inherited through shared common descent of the parental generation. Our results help to explain similarities in gut microbiomes within and between groups of social mammals.

Keywords [en]
Gut microbiome, 16S rRNA gene amplicon, social, mammal, life-history, transgenerational effects, Damaraland mole-rat, group living, microbiome similarity
National Category
Evolutionary Biology Ecology Microbiology
Research subject
Ecology, Evolutionary Biology
Identifiers
URN: urn:nbn:se:lnu:diva-125465OAI: oai:DiVA.org:lnu-125465DiVA, id: diva2:1809418
Available from: 2023-11-03 Created: 2023-11-03 Last updated: 2023-11-07Bibliographically approved
In thesis
1. Social below ground: Life-history and gut microbiome of Damaraland mole-rats
Open this publication in new window or tab >>Social below ground: Life-history and gut microbiome of Damaraland mole-rats
2023 (English)Doctoral thesis, comprehensive summary (Other academic)
Abstract [en]

Studying the consequences of variation in individual life-histories is vital for our understanding of the evolution of animal societies. In this thesis, I study the ecology and consequences of group living on growth, survival, reproduction, and the gut microbiome of the Damaraland mole-rat (Fukomys damarensis), a subterranean cooperatively breeding mammal. For this, I used data and faecal samples collected from a long-term study population in the Kalahari Desert, South Africa.

I explored the effects of group size and group composition on individuals’ growth and survival. While large group size had no clear advantages for either growth or survival, individuals within groups biased to their own sex grew more slowly. The number of recruits increased modestly with group size, but experimentally created pairs showed the same reproductive success as established groups. Further, single individuals exhibited high survival rates and good body condition. Combined, these results suggest that mole-rats delay dispersal to maximise their own fitness, and that group living has costs and benefits for all group members.

I also investigated the effects of individual life-histories and group affiliation on the gut microbiome. This work shows that individuals bring the gut microbiome from their birth group when they disperse, and that group members have more similar gut microbiomes. When dispersed individuals start to reproduce in their new groups, they subsequently transfer this microbiome to their offspring, resulting in higher similarity between offspring with common descent of breeders. This pattern could arise from shared early life environment of breeders or through genetic relatedness of breeders. To separate the effects of these factors, I used a cross-foster experiment of captive animals, which showed that group members have more similar gut microbiomes, regardless of host relatedness.

My thesis gives deepened insights into the ecology of the Damaraland mole-rat. It shows how variation in the social environment of group living species affects their life-histories, their fitness, and beyond that extended phenotypic traits such as the gut microbiome composition.

Place, publisher, year, edition, pages
Linnaeus University Press, 2023. p. 61
Series
Linnaeus University Dissertations ; 512
National Category
Ecology Evolutionary Biology
Research subject
Ecology, Evolutionary Biology; Natural Science, Ecology
Identifiers
urn:nbn:se:lnu:diva-125469 (URN)10.15626/LUD.512.2023 (DOI)9789180821001 (ISBN)9789180821018 (ISBN)
Public defence
2023-12-08, Sal Fullriggaren, Hus Magna, Kalmar, 09:00 (English)
Opponent
Supervisors
Available from: 2023-11-07 Created: 2023-11-03 Last updated: 2023-11-17Bibliographically approved

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Bensch, HannaTolf, ConnyWaldenström, JonasLundin, DanielZöttl, Markus

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