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  • 1.
    Ali, Sharafat
    Linnaeus University, Faculty of Technology, Department of Built Environment and Energy Technology. Linnaeus University, Linnaeus Knowledge Environments, Advanced Materials.
    Novel thin films in the M-Si-O-N systems2019In: Presented at the Fourth International Conference on Nanomaterials: Synthesis, Characterization and Applications (ICN 2019). 12-14 April 2019, Kerala, India, 2019, p. 7-7Conference paper (Refereed)
  • 2.
    Ali, Sharafat
    et al.
    Linnaeus University, Faculty of Technology, Department of Built Environment and Energy Technology. Linnaeus University, Linnaeus Knowledge Environments, Advanced Materials.
    Ellison, Adam
    Glass Science and Technology Corning Incorporated, USA.
    Luo, Jian
    Glass Science and Technology Corning Incorporated, USA.
    Edén, Mattias
    Stockholm University, Sweden.
    Composition–structure–property relationships of transparent Ca–Al–Si–O–N oxynitride glasses: The roles of nitrogen and aluminum2023In: Journal of The American Ceramic Society, ISSN 0002-7820, E-ISSN 1551-2916, Vol. 106, no 3, p. 1748-1765Article in journal (Refereed)
    Abstract [en]

    We explore the formation and composition–structure–property correlations of transparent Ca–Al–Si–O–N glasses, which were prepared by a standard melt-quenching technique using AlN as the nitrogen source and incorporating up to 8 at.% of N. Their measured physical properties of density, molar volume, compactness, refractive index, and hardness—along with the Young, shear, and bulk elastic moduli—depended roughly linearly on the N content. These effects are attributed primarily to the improved glass-network cross-linking from N compared to O, rather than the formation of higher-coordination AlO5 and AlO6 groups, where 27Al magic-angle-spinning nuclear magnetic resonance experimentation revealed that aluminum is predominately present in tetrahedral coordination as AlO4 units. Yet, several physical properties, such as the refractive index along with the bulk, shear, and Young's elastic moduli, increase concomitantly with the Al content of the glass. We discuss the incompletely understood mechanical–property boosting role of Al as observed both herein and in previous reports on oxynitride glasses, moreover suggesting glass-composition domains that are likely to offer optimal mechanical properties. 

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  • 3.
    Ali, Sharafat
    et al.
    Linnaeus University, Faculty of Technology, Department of Built Environment and Energy Technology. Linnaeus University, Linnaeus Knowledge Environments, Advanced Materials.
    Paul, Biplab
    Linköping University, Sweden.
    Magnusson, Roger
    Linköping University, Sweden.
    Erik, Ekström
    Linköping University, Sweden.
    Pallier, Camille
    Linköping University, Sweden.
    Jonson, Bo
    Linnaeus University, Faculty of Technology, Department of Built Environment and Energy Technology. Linnaeus University, Linnaeus Knowledge Environments, Advanced Materials.
    Eklund, Per
    Linköping University, Sweden.
    Birch, Jens
    Linköping University, Sweden.
    Optical and mechanical properties of amorphous Mg-Si-O-N thin films deposited by reactive magnetron sputtering2019In: Surface & Coatings Technology, ISSN 0257-8972, E-ISSN 1879-3347, Vol. 372, no 25, p. 9-15Article in journal (Refereed)
    Abstract [en]

    In this work, amorphous thin films in Mg-Si-O-N system typically containing >15 at.% Mg and 35 at.% N were prepared in order to investigate especially the dependence of optical and mechanical properties on Mg composition. Reactive RF magnetron co-sputtering from magnesium and silicon targets were used for the deposition of Mg-Si-O-N thin films. Films were deposited on float glass, silica wafers and sapphire substrates in an Ar, N2 and O2 gas mixture. X-ray photoelectron spectroscopy, atomic force microscopy, scanning electron microscopy, spectroscopic ellipsometry, and nanoindentation were employed to characterize the composition, surface morphology, and properties of the films. The films consist of N and Mg contents up to 40 at.% and 28 at.%, respectively and have good adhesion to substrates and are chemically inert. The thickness and roughness of the films increased with increasing content of Mg. Both hardness (16–21 GPa) and reduced elastic modulus (120–176 GPa) are strongly correlated with the amount of Mg content. The refractive index up to 2.01 and extinction coefficient up to 0.18 were found to increase with Mg content. The optical band gap (3.1–4.3) decreases with increasing the Mg content. Thin film deposited at substrate temperature of 100 °C shows a lower value of hardness (10 GPa), refractive index (1.75), and higher values of reduced elastic modulus (124 GPa) as compared to the thin film deposited at 310 °C and 510 °C respectively, under identical synthesis parameters.

  • 4.
    Bhatnagar, Amit
    et al.
    Linnaeus University, Faculty of Health and Life Sciences, Department of Biology and Environmental Science.
    Sillanpää, Mika
    Lappeenranta University of Technology, Finland.
    Application of Nanoadsorbents in Water Treatment2014In: Nanomaterials for Environmental Protection / [ed] Boris I. Kharisov, Oxana V. Kharissova, & H. V. Rasika Dias, John Wiley & Sons, 2014, 1, p. 237-247Chapter in book (Other academic)
    Abstract [en]

    Water treatment using the adsorption process has been found to be one of the most widely used methods, and several wastewater treatment plants around the world are operating on the principle of adsorption. Numerous adsorbents, for example, activated carbon, silica gel, zeolites, low-cost adsorbents from agro-industrial wastes, biosorbents, mineral-based adsorbents, and layered-double hydroxides, have been examined for their potential in the removal (adsorption) of diverse types of aquatic pollutants. In recent years, nanotechnology has emerged as one of the attractive technologies for water treatment, and various nanoadsorbents have been explored for water treatment applications. This chapter briefly summarizes the progress, advances, and applications of nanoadsorbents for water remediation. A compilation of various nanoadsorbents as reported in the literature has been presented, and their main findings related to water treatment applications are discussed. The chapter concludes with a discussion on the future perspectives in this field.

  • 5.
    Diuldin, M. V.
    et al.
    All-Russian Research Institute of Phytopathology, Russia;Peter the Great Saint Petersburg Polytechnic University, Russia.
    Melebayew, D.
    Turkmen State University Named after Magtymguly, Turkmenistan.
    Terukov, E.
    Ioffe Institute, Russia.
    Hogland, William
    Linnaeus University, Faculty of Health and Life Sciences, Department of Biology and Environmental Science.
    Kosolapov, V. M.
    FWRC WPA Moscow, Russia.
    Bobyl, A. V.
    Ioffe Institute, Russia.
    Pashikova, T. D.
    Yagshygeldi Kakayev International University of Oil and Gas, Turkmenistan.
    Garadzha, N.
    Lomonosov Moscow State Unuiversity, Russia.
    Shamuhammedowa, M.
    Turkmen State University Named after Magtymguly, Turkmenistan.
    Highly sensitive photodetectors on the basis of Au-oxide-n-GaP0.4As0.62022In: IOP Conference Series: Earth and Environmental Science, Volume 1096,, Institute of Physics (IOP), 2022, Vol. 1096, no 1, article id 012005Conference paper (Refereed)
    Abstract [en]

    This paper presents the results of studies of the photoelectric properties of Au-oxide-n-GaP0.4As0.6 nanostructures with different thicknesses of oxide layer (10-100Å) in the visible and ultraviolet regions of the spectrum. As a result, photodetectors of UV radiation based on Au-oxide-n-GaAs0.6P0.4 nanostructures with an optimal thickness of the oxide layer (δ=30-60 Å) were developed. The creation of highly effective photodetectors of solar ultraviolet radiation (λ=280-400 nm, h ...=3,1-4,43 eV) for ecological purposes has been reported. © Published under licence by IOP Publishing Ltd.

  • 6.
    Ekstrand, Johan
    Linnaeus University, Faculty of Technology, Department of Forestry and Wood Technology.
    Enhancement of Phenol Formaldehyde Adhesive with Crystalline Nano Cellulose2019Independent thesis Basic level (professional degree), 10 credits / 15 HE creditsStudent thesis
    Abstract [en]

    Abstract

    The wood industries to this day use almost exclusively petroleum derived adhesives that are based mainly on the reaction of formaldehyde with urea, melamine or phenol. These adhesives have low cost and good adjustable properties which makes it hard for bio-based alternatives to compete. Phenol formaldehyde (PF), as an example of a synthetic adhesive, has been in use for over 100 years. In some parts of the world, legislation around formaldehyde is changing, and there is an increasingly voluntary awareness about the toxicity and unsustainability of formaldehyde. Industries realize that raw materials from oil is unstainable. The latter is currently a driving factor behind research on alternatives to amino based adhesives. Also, consumer interest in healthy and sustainable products, such as emitting less formaldehyde indoors, increases the need for bio based adhesives.

    Cellulose contained in plant cell walls is a renewable, abundant and nontoxic resource. During the last decades, many innovations have been achieved around cellulose and this trend does not seem to be slowing down. Cellulose shows excellent mechanical properties, high strength, high elastic modulus as well as having a low density.

    Research about cellulose reinforced adhesives has been increased the last years. This thesis studied the enhancement of phenol formaldehyde adhesive with Crystalline Nano Cellulose (CNC) at 5wt% and 10wt% loading levels for producing plywood boards. Indecisive results when using CNC higher than 3wt%, especially with PF resin, have been reported by other authors.

    In this thesis, European standards were applied. EN 314 was applied to test the panels shear strength. Three (3) treatment classes were selected, indoor room condition as well as pre-treatments 5.1.1 and 5.1.3. Other properties measured were modulus of elasticity, thickness swelling, formaldehyde emissions.

    Results showed a shear strength increase for all pre-treatment classes. 10wt% CNC mixture with phenol formaldehyde in water bath, pre-treatment (5.1.1) for 24h showed the highest increase in shear strength (+73,9%). The 10 wt% CNC mixture panels also showed the highest wood fibre failure of all panel types produced. A decrease in MOE has been observed with 10 wt% CNC compared to the 5 wt% CNC panels. Formaldehyde emissions tests were inconclusive, but since less PF was used, there was a general reduction in emissions. The 5 wt% CNC panels were superior in terms of modulus of elasticity and swelling and also showed improved shear strength. 

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  • 7.
    Gas, Katarzyna
    et al.
    Polish Academy of Sciences, Poland.
    Sadowski, Janusz
    Linnaeus University, Faculty of Technology, Department of Physics and Electrical Engineering. Polish Academy of Sciences, Poland.
    Sawicki, Maciej
    Polish Academy of Sciences, Poland.
    Magnetic properties of wurtzite (Ga,Mn)As2021In: Journal of Magnetism and Magnetic Materials, ISSN 0304-8853, E-ISSN 1873-4766, Vol. 533, article id 168012Article in journal (Refereed)
    Abstract [en]

    Here we report on detailed studies of the magnetic properties of the wurtzite (Ga,Mn)As cylindrical shells. Ga0.94Mn0.06As shells have been grown by molecular beam epitaxy at low temperature as a part of multishell cylinders overgrown on wurtzite (Ga,In)As nanowires cores, synthesized on GaAs (111)B substrates. Our studies clearly indicate the presence of a low temperature ferromagnetic coupling, which despite a reasonably high Mn contents of 6% is limited only to below 30 K. A set of dedicated measurements shows that despite a high structural quality of the material the magnetic order has a granular form, which gives rise to the dynamical slowdown characteristic to blocked superparamagnets. The lack of the long range order has been assigned to a very low hole density, caused primarily by numerous compensation donors, arsenic antisites, formed in the material due to a specific geometry of the growth of the shells on the nanowire template. The associated electrostatic disorder has formed a patchwork of spontaneously magnetized (macrospin) and nonmagnetic (paramagnetic) volumes in the material. Using high field results it has been evaluated that the total volume taken by the macrospins constitute about 2/3 of the volume of the (Ga,Mn)As whereas in the remaining 1/3 only paramagnetic Mn ions reside. By establishing the number of the uncoupled ions the two contributions were separated. The Arrott plot method applied to the superparamagnetic part yielded the first experimental assessment of the magnitude of the spin-spin coupling temperature within the macrospins in (Ga,Mn)As, TC = 28 K. In a broader view our results constitute an important contribution to the still ongoing dispute on the true and the dominant form(s) of the magnetism in this model dilute ferromagnetic semiconductor.

  • 8.
    Houshmand, F.
    et al.
    K.N. Toosi University of technology, Iran;Technical and Vocational University, Iran.
    Friedman, Ran
    Linnaeus University, Faculty of Health and Life Sciences, Department of Chemistry and Biomedical Sciences. Linnaeus University, Linnaeus Knowledge Environments, Advanced Materials.
    Jalili, S.
    K.N. Toosi University of technology, Iran.
    Schofield, J.
    University of Toronto, Canada.
    Exciton effect in new generation of carbon nanotubes: graphdiyne nanotubes2020In: Journal of Molecular Modeling, ISSN 1610-2940, E-ISSN 0948-5023, Vol. 26, no 7, p. 1-10, article id 171Article in journal (Refereed)
    Abstract [en]

    Graphdiyne-based nanotubes (GDNTs) are a novel type of carbon nanotubes. While conventional carbon nanotubes (CNTs) aregenerated by rolling graphene sheets, GDNTs are generated by rolling sheets that are similar to graphene but where the edges areelongated by the introduction of additional acetylene bonds between vertices (C6 aromatic rings). Such nanotubes are predicted tohave many useful practical applications, but a thorough understanding of the relationship between their structure and theirphysical properties is still missing. We present a theoretical study of the electronic and optical properties of GDNTs. Thestructural, electronic, and optical properties of GDNTs with different diameters (i.e., 2–10 additional acetylene bonds) havebeen studied systematically by using density function theory (DFT) and self-consistent charge density functional tight-binding(SCC-DFTB) and by solving the Bethe–Salpeter equation (BSE), with and without considering the electron-hole interactions.The results indicate that the GDNTs are semiconductors with the direct band gap in close range, which is beneficial forphotoelectronic devices and applications. Moreover, the absorption spectra of the GDNTs with different edge structures, (armchair,and zigzag) revealed little differences between the optical spectra of armchair and zigzag GDNTs, which could mean thatfine separation between those structures (a process that is likely difficult and expensive in practice) will not be necessary.Importantly, the nanotubes were highly stable based on their cohesive energies, and their exciton binding energies were as largeas about ~ 1 eV. From a methodological point of view, SCC-DFTB was found to be in agreement with more elaborate DFTcalculations for most systems.

  • 9.
    Lard, Mercy
    et al.
    Lund University.
    ten Siethoff, Lasse
    Linnaeus University, Faculty of Health and Life Sciences, Department of Chemistry and Biomedical Sciences.
    Kumar, Saroj
    Linnaeus University, Faculty of Health and Life Sciences, Department of Chemistry and Biomedical Sciences. Delhi Technological University, India.
    Persson, Malin
    Linnaeus University, Faculty of Health and Life Sciences, Department of Chemistry and Biomedical Sciences.
    te Kronnie, G.
    University of Padova, Italy.
    Månsson, Alf
    Linnaeus University, Faculty of Health and Life Sciences, Department of Chemistry and Biomedical Sciences.
    Linke, H.
    Lund University.
    Nano-structuring for molecular motor control2015In: Nano-Structures for Optics and Photonics: Optical Strategies for Enhancing Sensing, Imaging, Communication and Energy Conversion / [ed] Baldassare Di Bartolo, John Collins, Luciano Silvestri, Springer, 2015, p. 459-459Conference paper (Refereed)
    Abstract [en]

    The interaction of self-propelled biological molecular-motors and cytoskeletal filaments holds relevance for a variety of applications such as biosensing, drug screening, diagnostics and biocomputation. The use of these systems for lab-on-a-chip biotechnology applications shows potential for replacement of microfluidic flow by active, molecular-motor driven transport of filaments. The ability to control, confine and detect motile objects in such a system is possible by development of nanostructured surfaces for on-chip applications and fundamental studies of molecular-motors. Here we describe the localized detection (Lard et al., Sci Rep 3:1092, 2013) and fast transport of actin filaments by myosin molecular-motors (Lard et al., Biosens Biolectron 48(0):145–152, 2013), inserted within nanostructures, as a method for biocomputation and molecular concentration. These results include extensive myosin driven concentration of actin filaments on a miniaturized detector, of relevance for use of molecular-motors in a diagnostics platform. Also, we discuss the local enhancement of the fluorescence signal of filaments, relevant for use in a biocomputation device where tracking of potentially thousands of motile objects is of primary significance.

  • 10.
    Rahman, Mohammad A.
    Linnaeus University, Faculty of Health and Life Sciences, Department of Chemistry and Biomedical Sciences.
    Biophysical studies of the actin-myosin motor system and applications in nanoscience2019Doctoral thesis, comprehensive summary (Other academic)
    Abstract [en]

    The actin-myosin motor system plays important roles in cellular processes. In addition, actin and myosin have been used for developments towards nanotechnological applications in recent years. Therefore, fundamental biophysical studies of actin and myosin and the actomyosin force generating cycle are important both in biology and for nanotechnology where the latter applications require methodological insights for optimization. This dual goal is central in the present thesis with major focus on factors that control the function (e.g. velocity) and the effectiveness of transport of filaments (e.g. filament flexural rigidity) through nanoscale channels with supplementation of methodological insights. The thesis thus provides evidence that actin is a dynamic filament whose flexural rigidity is different at different MgATP concentrations as well as in the presence or absence of myosin binding. Furthermore, probing the myosin ATPase cycle with the myosin inhibitor blebbistatin revealed that velocity is easily modified by this drug. Our detailed studies also suggest that actin-myosin force generation is preceded by Pi release and that blebbistatin changes the rate limiting transition in the cycle from the attachment step to a step between weakly attached states. The studies of actin dynamics and of the actomyosin force generating cycle were largely performed using in vitro motility assay (IVMA) where surface adsorbed myosin motor or its proteolytic fragments propel fluorescently labeled actin filaments. The IVMA is often taken as the basis for developments towards different nanotechnological applications. However, in the IVMA, actomyosin motility is often negatively affected by the presence of “dead”, non-functional myosin heads. Therefore, in this thesis, two popular methods, that are often used to remove dead myosin heads, are analyzed and compared. It was found that after affinity purification, the in vitro actin sliding velocity is reduced compared to the control conditions, something that was not seen with the use of blocking actin. Therefore, the effects of the affinity purification method should be considered when interpreting IVMA data. This is important while using IVMA both for fundamental studies and for nanotechnological applications. Another issue in the use of IVMAs in nanotechnological applications is the requirement for expensive and time-consuming fabrication of nanostructured devices. We therefore developed a suitable method for regenerating molecular motor based bionanodevices without a need to disassemble the flow cell. Evidence is presented that, use of proteinase K with a suitable detergent (SDS or Triton X100) lead to successful regeneration of devices where both actin-myosin and microtubule-kinesin motility are used. Lastly, this thesis presents efforts to immobilize engineered light sensitive myosin motors on trimethyl chlorosilane (TMCS) derivatized surfaces for light operated switching of myosin motor in order to control actin movement in nano-networks. This has potential for developing a programmable junction in a biocomputation network. In brief, the described results have contributed both to the fundamental understanding of actin and myosin properties and the actomyosin interaction mechanisms. They have also given technical insights for molecular motor based bionanotechnology.

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  • 11.
    Reuther, Cordula
    et al.
    Technische Universität Dresden, Germany.
    Catalano, Rachele
    Technische Universität Dresden, Germany.
    Salhotra, Aseem
    Linnaeus University, Faculty of Health and Life Sciences, Department of Chemistry and Biomedical Sciences.
    Vemula, Venukumar
    Linnaeus University, Faculty of Health and Life Sciences, Department of Chemistry and Biomedical Sciences.
    Korten, Till
    Technische Universität Dresden, Germany.
    Diez, Stefan
    Technische Universität Dresden, Germany;Max Planck Institute of Molecular Cell Biology and Genetics, Germany.
    Månsson, Alf
    Linnaeus University, Faculty of Health and Life Sciences, Department of Chemistry and Biomedical Sciences. Linnaeus University, Linnaeus Knowledge Environments, Advanced Materials.
    Comparison of actin- and microtubule-based motility systems for application in functional nanodevices2021In: New Journal of Physics, E-ISSN 1367-2630, Vol. 23, no 7, article id 075007Article in journal (Refereed)
    Abstract [en]

    Over the last 25 years, extensive progress has been made in developing a range of nanotechnological applications where cytoskeletal filaments and molecular motors are key elements. This includes novel, highly miniaturized lab on a chip systems for biosensing, nanoseparation etc but also new materials and parallel computation devices for solving otherwise intractable mathematical problems. For such approaches, both actin-based and microtubule-based cytoskeletal systems have been used. However, in accordance with their different cellular functions, actin filaments and microtubules have different properties and interaction kinetics with molecular motors. Therefore, the two systems obviously exhibit different advantages and encounter different challenges when exploited for applications. Specifically, the achievable filament velocities, the capability to guide filaments along nanopatterned tracks and the capability to attach and transport cargo differ between actin- and microtubule-based systems. Our aim here is to systematically elucidate these differences to facilitate design of new devices and optimize future developments. We first review the cellular functions and the fundamental physical and biochemical properties of actin filaments and microtubules. In this context we also consider their interaction with molecular motors and other regulatory proteins that are of relevance for applications. We then relate these properties to the advantages and challenges associated with the use of each of the motor-filament systems for different tasks. Finally, fundamental properties are considered in relation to some of the most interesting future development paths e.g. in biosensing and biocomputation.

  • 12.
    Salhotra, Aseem
    Linnaeus University, Faculty of Health and Life Sciences, Department of Chemistry and Biomedical Sciences.
    Actomyosin in biocomputation2021Doctoral thesis, comprehensive summary (Other academic)
    Abstract [en]

    There exist complex mathematical problems that are important in real world applications such as weather prediction, molecular modelling, network route optimization and more. In general, such problems are solved using supercomputers with higher computing efficiency but this also consumes high energy along with high production and maintenance cost. Network-based biocomputation (NBC) is an alternate computing approach, now at development stage, that can perform parallel computing in a highly energy efficient manner. Actin and myosin constitute one type of molecular motor system that has been utilized for the development of NBC. These proteins are key components in the sarcomere, the smallest functional unit of muscle and their interactions that underlie muscle contraction are powered by the cellular fuel adenosine triphosphate (ATP). To solve larger complex problems using actin-myosin based NBC, factors such as maintained biological function and longevity of operation are essential for practical relevance. In this thesis, the in vitro motility assay (IVMA) has been used as a central method to study actomyosin function and its operation within NBC devices. In the IVMA, actin filaments are propelled by myosin motors that are immobilized on functionalized surfaces in a flow cell. With the aim to improve motile fraction by reducing the interaction between actin and non-functional motor heads in the IVMA, two known methods were quantitatively compared in paper I, the affinity purification and the blocking actin method. Both approaches significantly improved the motile fraction to above 90% but affinity purification, due to the presence of ATP during incubation, induced significant reduction in sliding velocity, not seen with blocking actin. In paper III, critical parameters in the actomyosin IVMA system were investigated allowing us to extensively improve function and longevity, including: biocompatibility of flow cell components, effects of air exposure with oxygen scavenging and nanofabrication parameters such as plasma etching type and time, process of resist development, and surface silanization time. The above developments together with optimized network encoding of the problems enabled us (paper IV) to solve four instances of 3-SAT problem encoded in NBC with 99% probability of satisfiability. In parallel, (paper II) a method have been developed to recycle the surfaces with immobilized motor proteins by treatment of proteinase-K enzyme and detergent. This will allow re-cycling of advanced NBC chips. Finally, with aim to develop programmable gating for NBC, attempts have been made towards the integration of engineered light sensitive myosin XI motors with nanofabricated devices made up of Au/SiO2, SiO2/polymer and glass/polymer (paper V). In addition important factors such as standardized motor density, limiting of air exposure and longevity function have been optimized in the use of light sensitive motors.

    Overall, this thesis reports critical insights for the upscaling of actomyosin based NBC. Described results, are also useful for the development of actomyosin based nanotechnological applications such as biosensing or diagnostics and other fundamental studies based on single molecule or drug testing.

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  • 13.
    Salhotra, Aseem
    et al.
    Linnaeus University, Faculty of Health and Life Sciences, Department of Chemistry and Biomedical Sciences.
    Zhu, Jingyuan
    Lund University, Sweden.
    Surendiran, Pradheebha
    Lund University, Sweden.
    Meinecke, Christoph Robert
    Technische Universität Chemnitz, Germany;Fraunhofer Institute for Electronic Nanosystems (ENAS), Germany.
    Lyttleton, Roman
    Lund University, Sweden.
    Ušaj, Marko
    Linnaeus University, Faculty of Health and Life Sciences, Department of Chemistry and Biomedical Sciences.
    Lindberg, Frida
    Lund University, Sweden.
    Norrby, Marlene
    Linnaeus University, Faculty of Health and Life Sciences, Department of Chemistry and Biomedical Sciences.
    Linke, Heiner
    Lund University, Sweden.
    Månsson, Alf
    Linnaeus University, Faculty of Health and Life Sciences, Department of Chemistry and Biomedical Sciences. Linnaeus University, Linnaeus Knowledge Environments, Advanced Materials.
    Prolonged function and optimization of actomyosin motility for up scaled network-based biocomputation2021In: New Journal of Physics, E-ISSN 1367-2630, Vol. 23, article id 085005Article in journal (Refereed)
    Abstract [en]

    Significant advancements have been made towards exploitation of naturally available molecular motors and their associated cytoskeletal filaments in nanotechnological applications. For instance, myosin motors and actin filaments from muscle have been used with the aims to establish new approaches in biosensing and network-based biocomputation. The basis for these developments is a version of the in vitro motility assay (IVMA) where surface-adsorbed myosin motors propel the actin filaments along suitably derivatized nano-scale channels on nanostructured chips. These chips are generally assembled into custom-made microfluidic flow cells. For effective applications, particularly in biocomputation, it is important to appreciably prolong function of the biological system. Here, we systematically investigated potentially critical factors necessary to achieve this, such as biocompatibility of different components of the flow cell, the degree of air exposure, assay solution composition and nanofabrication methods. After optimizing these factors we prolonged the function of actin and myosin in nanodevices for biocomputation from <20 min to >60 min. In addition, we demonstrated that further optimizations could increase motility run times to >20 h. Of great importance for the latter development was a switch of glucose oxidase in the chemical oxygen scavenger system (glucose oxidase–glucose–catalase) to pyranose oxidase, combined with the use of blocking actin (non-fluorescent filaments that block dead motors). To allow effective testing of these approaches we adapted commercially available microfluidic channel slides, for the first time demonstrating their usefulness in the IVMA. As part of our study, we also demonstrate that myosin motor fragments can be stored at −80 °C for more than 10 years before use for nanotechnological purposes. This extended shelf-life is important for the sustainability of network-based biocomputation.

  • 14.
    Surendiran, Pradheebha
    et al.
    Lund University, Sweden.
    Meinecke, Christoph Robert
    Technische Universität Chemnitz, Germany.
    Salhotra, Aseem
    Linnaeus University, Faculty of Health and Life Sciences, Department of Chemistry and Biomedical Sciences.
    Heldt, Georg
    Linnaeus University, Faculty of Health and Life Sciences, Department of Chemistry and Biomedical Sciences.
    Zhu, Jingyuan
    Lund University, Sweden.
    Månsson, Alf
    Linnaeus University, Faculty of Health and Life Sciences, Department of Chemistry and Biomedical Sciences.
    Diez, Stefan
    Technische Universität Dresden, Germany;Max Planck Institute of Molecular Cell Biology and Genetics, Germany.
    Reuter, Danny
    Technische Universität Chemnitz, Germany;Fraunhofer Institute for Electronic Nano Systems ENAS, Germany.
    Kugler, Hillel
    Bar-Ilan University, Israel.
    Linke, Heiner
    Lund University, Sweden.
    Korten, Till
    Technische Universität Dresden, Germany.
    Solving Exact Cover Instances with Molecular-Motor-Powered Network-Based Biocomputation2022In: ACS Nanoscience Au, E-ISSN 2694-2496, Vol. 2, no 5, p. 396-403Article in journal (Refereed)
    Abstract [en]

    Information processing by traditional, serial electronic processors consumes an ever-increasing part of the global electricity supply. An alternative, highly energy efficient, parallel computing paradigm is network-based biocomputation (NBC). In NBC a given combinatorial problem is encoded into a nanofabricated, modular network. Parallel exploration of the network by a very large number of independent molecular-motor-propelled protein filaments solves the encoded problem. Here we demonstrate a significant scale-up of this technology by solving four instances of Exact Cover, a nondeterministic polynomial time (NP) complete problem with applications in resource scheduling. The difficulty of the largest instances solved here is 128 times greater in comparison to the current state of the art for NBC. © 2022 ACS Nanoscience Au. All right reserved.

  • 15.
    Taghiyari, Hamid Reza
    et al.
    Shahid Rajaee Teacher Training University, Iran.
    Tajvidi, Mehdi
    University of Maine, USA.
    Taghiyari, Reyhaneh
    Payame Noor University, Iran.
    Mantanis, George
    University of Thessaly, Greece.
    Esmailpour, Ayoub
    Shahid Rajaee Teacher Training University, Iran.
    Hosseinpourpia, Reza
    Linnaeus University, Faculty of Technology, Department of Forestry and Wood Technology. Linnaeus University, Linnaeus Knowledge Environments, Advanced Materials.
    Nanotechnology for wood quality improvement and protection2020In: Nanomaterials for Agriculture and Forestry Applications: Micro and Nano Technologies / [ed] Azamal Husen and Mohammad Jawaid, Elsevier, 2020, p. 469-489Chapter in book (Refereed)
    Abstract [en]

    Wood is a natural renewable material with unique properties helping mankind to build and develop its communities since the genesis of human on the Earth. Moreover, wood/cellulosic composites provide the opportunity to utilize low-density wood species and agricultural materials that are basically not suitable for structural applications. Although wood is considered irreplaceable, it has some disadvantages narrowing its applications and limiting its service life. These disadvantages mainly include its susceptibility to water and water vapor, biological deteriorating fungi, insects, termites, and marine borers. The present chapter tries to summarize some main areas in which nanotechnology is being used to improve wood and lignocellulosic-based composite panels. Moreover, some new applications and capabilities of this precious natural material are also brought into perspective, areas such as transparent wood, self-cleaning coatings, and smart windows. Though some areas have been thoroughly studied, much potential still exists for further studies and commercialization.

  • 16.
    van Delft, Falco C. M. J. M.
    et al.
    Mol Sense Ltd, UK.
    Månsson, Alf
    Linnaeus University, Faculty of Health and Life Sciences, Department of Chemistry and Biomedical Sciences. Linnaeus University, Linnaeus Knowledge Environments, Advanced Materials. Lund University, Sweden.
    Kugler, Hillel
    Bar Ilan Univ, Israel.
    Korten, Till
    Tech Univ Dresden, Germany.
    Reuther, Cordula
    Tech Univ Dresden, Germany.
    Zhu, Jingyuan
    Lund University, Sweden.
    Lyttleton, Roman
    Lund University, Sweden.
    Blaudeck, Thomas
    Tech Univ Chemnitz, Germany;Fraunhofer Inst Elect Nanosyst ENAS, Germany.
    Meinecke, Christoph Robert
    Tech Univ Chemnitz, Germany;Fraunhofer Inst Elect Nanosyst ENAS, Germany.
    Reuter, Danny
    Tech Univ Chemnitz, Germany;Fraunhofer Inst Elect Nanosyst ENAS, Germany.
    Diez, Stefan
    Tech Univ Dresden, Germany;Max Planck Inst Mol Cell Biol & Genet, Germany.
    Linke, Heiner
    Lund University, Sweden.
    Roadmap for network-based biocomputation2022In: Nano Futures, E-ISSN 2399-1984, Vol. 6, no 3, article id 032002Article, review/survey (Refereed)
    Abstract [en]

    Network-based biocomputation (NBC) is an alternative, parallel computation approach that can potentially solve technologically important, combinatorial problems with much lower energy consumption than electronic processors. In NBC, a combinatorial problem is encoded into a physical, nanofabricated network. The problem is solved by biological agents (such as cytoskeletal filaments driven by molecular motors) that explore all possible pathways through the network in a massively parallel and highly energy-efficient manner. Whereas there is currently a rapid development in the size and types of problems that can be solved by NBC in proof-of-principle experiments, significant challenges still need to be overcome before NBC can be scaled up to fill a technological niche and reach an industrial level of manufacturing. Here, we provide a roadmap that identifies key scientific and technological needs. Specifically, we identify technology benchmarks that need to be reached or overcome, as well as possible solutions for how to achieve this. These include methods for large-scale production of nanoscale physical networks, for dynamically changing pathways in these networks, for encoding information onto biological agents, for single-molecule readout technology, as well as the integration of each of these approaches in large-scale production. We also introduce figures of merit that help analyze the scalability of various types of NBC networks and we use these to evaluate scenarios for major technological impact of NBC. A major milestone for NBC will be to increase parallelization to a point where the technology is able to outperform the current run time of electronic processors. If this can be achieved, NBC would offer a drastic advantage in terms of orders of magnitude lower energy consumption. In addition, the fundamentally different architecture of NBC compared to conventional electronic computers may make it more advantageous to use NBC to solve certain types of problems and instances that are easy to parallelize. To achieve these objectives, the purpose of this roadmap is to identify pre-competitive research domains, enabling cooperation between industry, institutes, and universities for sharing research and development efforts and reducing development cost and time.

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  • 17.
    Wu, Philip
    et al.
    Lund University.
    Paschoal Jr, Waldomiro
    Lund University.
    Kumar, Sandeep
    Lund University.
    Borschel, Christian
    Jena University.
    Ronning, Carsten
    Jena University.
    Canali, Carlo M.
    Linnaeus University, Faculty of Science and Engineering, School of Computer Science, Physics and Mathematics.
    Samuelson, Lars
    Lund University.
    Pettersson, Håkan
    Halmstad University.
    Linke, Heiner
    Lund University.
    Thermoelectric Characterization of Electronic Properties of GaMnAs Nanowires2012In: Journal of Nanotechnology, ISSN 1687-9503, E-ISSN 1687-9511, article id 480813Article in journal (Refereed)
    Abstract [en]

    Nanowires with magnetic doping centers are an exciting candidate for the study of spin physics and proof-of-principle spintronics devices. The required heavy doping can be expected to have a significant impact on the nanowires’ electron transport properties.

    Here, we use thermopower and conductance measurements for transport characterization of Ga0.95Mn0.05As nanowires over a broad temperature range. We determine the carrier type (holes) and concentration and find a sharp increase of the thermopower below temperatures of 120 K that can be qualitatively described by a hopping conduction model. However, the unusually large thermopower suggests that additional mechanisms must be considered as well.

  • 18.
    Zhu, Jingyuan
    et al.
    Lund University, Sweden.
    Korten, Till
    TU Dresden, Germany.
    Kugler, Hillel
    Bar-Ilan University, Israel.
    Van Delft, Falco
    Molecular Sense Ltd., UK.
    Månsson, Alf
    Linnaeus University, Faculty of Health and Life Sciences, Department of Chemistry and Biomedical Sciences. Linnaeus University, Linnaeus Knowledge Environments, Advanced Materials.
    Reuter, Danny
    Chemnitz University of Technology, Germany;Fraunhofer ENAS, Germany.
    Diez, Stefan
    TU Dresden, Germany;Max Planck Institute of Molecular Cell Biology and Genetics, Germany.
    Linke, Heiner
    Lund University, Sweden.
    Physical requirements for scaling up network-based biocomputation2021In: New Journal of Physics, E-ISSN 1367-2630, Vol. 23, no 10, article id 105004Article in journal (Refereed)
    Abstract [en]

    The high energy consumption of electronic data processors, together with physical challenges limiting their further improvement, has triggered intensive interest in alternative computation paradigms. Here we focus on network-based biocomputation (NBC), a massively parallel approach where computational problems are encoded in planar networks implemented with nanoscale channels. These networks are explored by biological agents, such as biological molecular motor systems and bacteria, benefitting from their energy efficiency and availability in large numbers. We analyse and define the fundamental requirements that need to be fulfilled to scale up NBC computers to become a viable technology that can solve large NP-complete problem instances faster or with less energy consumption than electronic computers. Our work can serve as a guide for further efforts to contribute to elements of future NBC devices, and as the theoretical basis for a detailed NBC roadmap.

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    fulltext
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