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Causes and consequences of genetic variation in oak
Linnaeus University, Faculty of Health and Life Sciences, Department of Biology and Environmental Science.ORCID iD: 0000-0002-9556-1235
2026 (English)Doctoral thesis, comprehensive summary (Other academic)
Abstract [en]

Genetic diversity is a key facet of biodiversity and is central to the understanding of eco-evolutionary processes. Recent biodiversity declines emphasize the need to understand not only how intraspecific diversity impacts the ecological success of populations and species, but also how it affects the structure and functioning of ecological communities — that is, the ecological consequences of genetic diversity. Although there is mounting evidence for positive effects of genetic diversity in experimental studies, it remains unclear if such effects also emerge in complex natural systems.

In this thesis, I report on patterns of genetic diversity and its ecological consequences in the pedunculate oak (Quercus robur) in Sweden. In a population genetics study, I first show that neutral, but not adaptive, genetic diversity declined towards the northern range margin. Despite limited population differentiation, I also detected signs of spatially varying selection, with frost timing and trophic interactions identified as putative selective drivers. Next, I combined the genetic data with oak growth data and found that higher genetic diversity was not associated with higher population growth rates, greater asynchrony in growth trends, or increased temporal stability in growth. Thereafter, I investigated associations of oak genetic diversity with the composition of associated communities. This showed that genetically diverse oak populations had lower levels of the oak powdery mildew pathogen, which affected the spatial distribution of leaf mining and gall-forming insects. Finally, I found that higher oak genetic diversity was associated with increased species richness and abundance in some, but not all, associated taxonomic groups. When present, this effect was comparable to or greater than that of other known drivers of species richness, namely oak biomass and latitude. Together, my findings point to local adaptations at the northern range margin of Q. robur. They also suggest that the effects of genetic diversity, except for oak growth performance, are sufficiently strong to manifest in natural systems. However, the relationships with associated communities were primarily evident in specific oak-associated communities, indicating taxon-specific effects that limit broad generalizations. I highlight the importance of preserving population-specific adaptations and genetic diversity to safeguard biodiversity and ecosystem functioning.

Place, publisher, year, edition, pages
Växjö: Linnaeus University Press, 2026. , p. 39
Series
Linnaeus University Dissertations ; 620
National Category
Ecology
Research subject
Natural Science, Ecology
Identifiers
URN: urn:nbn:se:lnu:diva-146558DOI: 10.15626/LUD.620.2026ISBN: 978-91-8082-456-9 (print)ISBN: 978-91-8082-457-6 (electronic)OAI: oai:DiVA.org:lnu-146558DiVA, id: diva2:2061941
Public defence
2026-06-12, Azur, House Vita, Linnaeus University, Kalmar, 09:00 (English)
Opponent
Supervisors
Funder
Swedish Research Council Formas, Dnr. 2021-02142Available from: 2026-05-25 Created: 2026-05-23 Last updated: 2026-05-25Bibliographically approved
List of papers
1. Spatially varying selection and contrasting patterns in neutral and adaptive genetic variation towards the cold-limited northern range margin in Quercus robur
Open this publication in new window or tab >>Spatially varying selection and contrasting patterns in neutral and adaptive genetic variation towards the cold-limited northern range margin in Quercus robur
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(English)Manuscript (preprint) (Other academic)
Abstract [en]

Abstract

Aim

Knowledge of the distribution of genetic variation at the cold-limited range margin and its alignment with changing climate conditions is critical to understand future range dynamics and productivity patterns. Yet, for most tree species, such information is still lacking. To address this, we examined patterns of neutral and adaptive genetic variation at the northern range margin of the long-lived Quercus robur.

Location

Sweden

Methods

We RAD-seq genotyped oaks from 21 northern marginal stands across five latitudinal degrees, and examined the relationship between genetic variation and latitude (proximity to range margin) for neutral and adaptive variation. With outlier analysis and gene-environment associations, we investigated potential drivers of spatially varying selection and identified candidate genes. Finally, we estimated climate vulnerability (genomic offset) and evaluated its predictive capacity using performance data from common garden trials.

Results

Results revealed limited among-stand differentiation, suggesting that all stands belong to a single genetic cluster, and indicated maintained adaptive variation across the latitudinal gradient despite declining neutral variation. Results identified signatures of spatially varying selection and local adaptations, and suggested that environmental conditions (spring and fall frost - whose timing and severity change with global warming) and trophic interactions likely have shaped the genetic variation and structure. Climate vulnerability analysis pointed to stand-specific rather than spatial effects and indicated that genomic offset - performance associations were weak at best.

Main conclusion

Our findings underscore the need for management to consider adaptive (rather than neutral) genetic variation and to preserve the diversity of stand-specific adaptations. Securing the overall adaptive potential and portfolio effects may enable this keystone species to cope with rapidly changing and uncertain future environmental conditions, thereby safeguarding associated biodiversity. Finally, the findings complicate generalizations regarding climate-vulnerability and call into question the utility of genomic offset estimates to inform management strategies at this spatial scale.

National Category
Evolutionary Biology
Identifiers
urn:nbn:se:lnu:diva-146537 (URN)
Available from: 2026-05-21 Created: 2026-05-21 Last updated: 2026-05-26
2. Among-individual asynchrony but not genetic diversity is associated with temporal stability of tree growth in natural Quercus robur oak stands
Open this publication in new window or tab >>Among-individual asynchrony but not genetic diversity is associated with temporal stability of tree growth in natural Quercus robur oak stands
2025 (English)In: Biology Letters, ISSN 1744-9561, E-ISSN 1744-957X, Vol. 21, no 9, article id 20250180Article in journal (Refereed) Published
Abstract [en]

Theory, manipulation experiments and observational studies on biodiversity and ecosystem functioning largely concur that higher intraspecific diversity may increase the overall productivity of populations, buffer against environmental change and stabilize long-term productivity. However, evidence comes primarily from small and short-lived organisms. We tested for effects of genetic diversity on variation in forest growth by combining long-term data on annual individual growth rate (basal area increment (BAI)) with estimates of intrapopulation genetic variation (based on RAD-seq SNPs) for 18 natural Quercus robur pedunculate oak populations. Higher total or adaptive genetic variability of populations was neither associated with faster average growth nor with increased temporal or spatial stability of growth nor with among-individual asynchrony in growth. However, as expected, we found that greater asynchrony of growth responses within the populations increased their temporal stability. Together, these findings point towards a negligible role of genetic variation in structuring growth patterns in natural populations of tree species. Identifying which environmental factors and phenotypic traits (and its genetic basis) contribute to asynchronous growth responses is an important next step towards a better mechanistic understanding of the causes of temporal stability in tree growth and forest productivity.

Place, publisher, year, edition, pages
Royal Society, 2025
Keywords
ecosystem stability, genetic variation, synchrony, productivity, temporal stability, biodiversity-ecosystem functioning
National Category
Ecology
Research subject
Natural Science, Ecology
Identifiers
urn:nbn:se:lnu:diva-141657 (URN)10.1098/rsbl.2025.0180 (DOI)001566654600002 ()40925550 (PubMedID)2-s2.0-105015551200 (Scopus ID)
Available from: 2025-09-22 Created: 2025-09-22 Last updated: 2026-05-23Bibliographically approved
3. Lower genetic variability in oak populations is associated with higher infection levels with consequences for the spatial distribution of insects
Open this publication in new window or tab >>Lower genetic variability in oak populations is associated with higher infection levels with consequences for the spatial distribution of insects
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(English)Manuscript (preprint) (Other academic)
Abstract [en]

The genetic variability of plant populations can shape their disease resistance; additionally, plant pathogens commonly modify the fitness and distribution of co-occurring plant-feeding insects. Host genetics may therefore induce cascading effects mediated via tripartite interactions at the population level. However, whether the mechanisms connecting plant genetic variability to pathogen infection and its effect on the associated insect community structure are sufficiently strong to manifest in natural populations is unclear. Using Quercus robur oak populations in Sweden as a model system, we show that powdery mildew (Erysiphe alphitoides) pathogen infection levels were higher in oak populations with lower inter-individual genetic variability. In turn, higher infection levels were associated with an increasingly patchy distribution of the associated plant-feeding insects among trees within populations. Lastly, the occurrence of leaf miners and gallers decreased with increasing infection levels within trees, but this pattern was less evident among trees and non-existing among populations, indicating scale-dependence. These results support that high genetic variability among hosts improves disease resistance in forests, and suggest that, via modified disease levels, genetic variability may indirectly affect the structure of the insect community.

National Category
Ecology
Identifiers
urn:nbn:se:lnu:diva-146539 (URN)
Available from: 2026-05-21 Created: 2026-05-21 Last updated: 2026-05-26
4. Taxon-specific effects of oak genetic diversity and biomass for associated biodiversity in natural forests
Open this publication in new window or tab >>Taxon-specific effects of oak genetic diversity and biomass for associated biodiversity in natural forests
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(English)Manuscript (preprint) (Other academic)
Abstract [en]

That genetically more diverse plant populations should host more diverse and abundant assemblages of associated species is well established in ecology. However, it remains unclear whether these effects are sufficiently strong to manifest in natural forest systems, whether different organism groups are differently impacted, and whether host genetic diversity is more or less important than other known biodiversity drivers. Using data from 17 forests, we show that oak populations with greater genetic diversity had higher species richness and abundance of specialist consumers (leaf miners and gallers), higher abundance of producers (epiphytic mosses), and lower community differences among trees for miners and gallers, and epiphytic lichens. Neither specialist nor generalist arthropods or vascular plants showed significant associations. When present, the contribution of genetic diversity was comparable to or greater than latitude and oak biomass. These taxon-specific responses have implications for the planning and assessment of forest management and biodiversity protection.

National Category
Ecology
Identifiers
urn:nbn:se:lnu:diva-146540 (URN)
Available from: 2026-05-21 Created: 2026-05-21 Last updated: 2026-05-26

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